Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015947193.1_cds_XP_016489010.1_79578
CDS Infomation

[gene=LOC107808960] [db_xref=GeneID:107808960] [protein=IAA-alanine resistance protein 1-like] [protein_id=XP_016489010.1] [location=join(111521..112142,113738..113821,113922..113971,115419..115470,116436..116552,117621..117898,118613..118759,118867..118974,119354..119455,119539..119583,119675..119830)] [gbkey=CDS]
Sequence

ATGTTATCCTTAAATTCAGTACAACTTTTCTGCAATTCTCAGAGGTCCAAACTCCATTTT
TGTTACACCCTTGAGGCCCCTCTTTCAAAGTCAAACTCCTTATACTATGGATGTAGTAAC
ATTCGGCATTATAATAGGCATAATAATACTCTTCTTCTGCGCTGTTTGTGTCTTCACCAT
CGAAGGCACTTGCAAAAACCGCAATTCTTGATTCCAAACATACTTTCCCCAAACACGCCC
TTATCACCCACTGTCTCTAAACCCTCCATAAATTTAGGGGTTTTACCTGATTTTGTTGTT
GCCCAGATTGAAAAAATGTCAAAGATTGAATCTTTACTGAAACAGATCTGTTTCTGTTTA
ATCCTTTCTATTTCTTTAGGGTTAGTGATTTTTGGGTCTTCTGTATCAGCTGAAGTTCAC
CAATGTAACCATGGTCATGGGCATAACCATGACCATCAGGGGCATCATCATCATCATGGG
TTGAGTGAAGTTAAGCAGAGGAAGCTTCCAGAAGAATTAGCAGAAGAAGAGGATCTAAAG
CTGTTAGGATTTGGGTCCCATGATGACGTGGACGTGCATCATCATCATAATGGACACGGA
GCCAAGGATCTTACTGGTCTTGGTCTATGGGTCAATGCAATGGGTTGCTCACTTTTGGTG
AGCTTGGCTTCCCTTATCTGCCTGATTATTTTGCCTGTAATATTTTTAAAAGGGAAGCCG
TCAAAAGCTGTTGTAGATTCTTTGGCGTTATTTGGGGCAGGAGCCATGCTGGGGGATGCT
TTCCTTCACCAATTGCCACATGCTTTTGGTGGTGGACACTCCCACTCACACGATCACCAT
GTGGAATCTGATCATCTTCATGATCACTCCGGTCATTCACATGCGCATTCGTTGGAGGAT
CTTTCTGTTGGATTGTCCATTTTGGCTGGAATTGTGCTCTTTCTTATTGTTGAGAAGATT
GTGAGGTATGTTGAAGATTTTTCTGGAGGAGCAGATGAATGGAGTCATGGTCATCATCAT
CATCGTCATACGCGCACCACAAAATTGAAGGATGACAATGATGCTAATGACGATCTCCAG
GAACTGTCTCAAGAGAAGAGCGGAAACCTATCAGAAAAGGCAGCTGGAGAGAGTGAAGTG
GACGGTCTGTCTGCTGACTCTCCCAATGGAGGAAAACCAAGTGGAGGAGCTATTCTCCGA
AAGAGGAATACTGGCTCCAGTGCTGCTGAAGACAATACTGTTTTAGATGCTGCAAATTGC
TCTACCAATTCTGAGTCAGTTGGAAAGGAACAAGCTAAATCACGGTCAAGCCTTGTCTTT
GGTTATCTCAACCTCTTCTCTGATGGTGTTCACAATTTTACTGATGGGATGGCGTTGGGA
AGTGCATTCCTCCTTTATGGATCAGTTGGTGGGTGGTCAAGAACTTTGTTTCTTCTCGCG
CATGAGATCCCTCAAGAGATAGGTGACTTTGGAATCTTGGTAAGGTCGGGGTTCAGCGTC
TCCAAAGCTCTCTTCTTTAACTTCTTATCTGCACTAGTGGCACTAGCCGGAACTGCACTG
GCATTGACGTTGGGACAAGATTCTGGTCAGTCGTCATTGATTGAAGGTTTTACTGCTGGC
GGCTTCATCTACATTTCGGTTGCTGGGGTGTTGGCTGAAATGAATAGTGGTAGCAGGACT
ACATTGATGAATACATTTATACAACTTATGTCACTGTTATCAGGAATGGCTGTTGCTCTT
TGTATCTCCCTTGTTGAATGA

Peptide Sequence

PEP ID

XP_016489010.1
PEP Infomation

PREDICTED: IAA-alanine resistance protein 1-like [Nicotiana tabacum]
Sequence

MLSLNSVQLFCNSQRSKLHFCYTLEAPLSKSNSLYYGCSNIRHYNRHNNTLLLRCLCLHH
RRHLQKPQFLIPNILSPNTPLSPTVSKPSINLGVLPDFVVAQIEKMSKIESLLKQICFCL
ILSISLGLVIFGSSVSAEVHQCNHGHGHNHDHQGHHHHHGLSEVKQRKLPEELAEEEDLK
LLGFGSHDDVDVHHHHNGHGAKDLTGLGLWVNAMGCSLLVSLASLICLIILPVIFLKGKP
SKAVVDSLALFGAGAMLGDAFLHQLPHAFGGGHSHSHDHHVESDHLHDHSGHSHAHSLED
LSVGLSILAGIVLFLIVEKIVRYVEDFSGGADEWSHGHHHHRHTRTTKLKDDNDANDDLQ
ELSQEKSGNLSEKAAGESEVDGLSADSPNGGKPSGGAILRKRNTGSSAAEDNTVLDAANC
STNSESVGKEQAKSRSSLVFGYLNLFSDGVHNFTDGMALGSAFLLYGSVGGWSRTLFLLA
HEIPQEIGDFGILVRSGFSVSKALFFNFLSALVALAGTALALTLGQDSGQSSLIEGFTAG
GFIYISVAGVLAEMNSGSRTTLMNTFIQLMSLLSGMAVALCISLVE

Transcript Sequence

Gene sequence data has not been registered.